blastp
Verified for current stable LTS
Blastp Command: Align Sequences Blastp Fast
Use for align sequences blastp fast with Blastp. Exact CLI syntax to align sequences blastp fast using Blastp.
When to use this: Use for align sequences blastp fast with Blastp.
Command Syntax
blastp -task blastp-fast -query <query.fa> -subject <subject.fa>blastp -task blastp-fast -query <query.fa> -subject <subject.fa>Command Breakdown
-task- Command Option
- Tool-specific option used by this command invocation.
-query- Command Option
- Tool-specific option used by this command invocation.
-subject- Command Option
- Tool-specific option used by this command invocation.
FAQ
Purpose: Exact syntax to align sequences blastp fast using Blastp.
Test path: Replace placeholders and run destructive commands in a disposable workspace first.
Flag behavior: Tool version, platform, and shell can change behavior.
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Related Operations
Blastp Command: Align Sequences Custom Tabular Output
blastp -query <query.fa> -subject <subject.fa> -outfmt '<6 qseqid qlen qstart qend sseqid slen sstart send bitscore evalue pident>' -out <output.tsv> Blastp Command: Align Sequences Evalue Output Screen blastp -query <query.fa> -subject <subject.fa> -evalue <1e-9> Blastp Command: Display Help blastp -h Blastp Command: Search Protein Database With Threads blastp -query <query.fa> -db <blast_database_name> -num_threads <16> -max_target_seqs <10> Blastp Command: Search Remote Nr Database blastp -query <query.fa> -db <nr> -remote